PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G00810.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 176aa    MW: 18973.8 Da    PI: 5.2481
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G00810.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.5e-1761153598
                      -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEE CS
               B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvk 95 
                        +s+ + + ++++p +f   h + ++e +t  + ++ g+sW   +  +++ ++  l +GW+eF+ +n+L +gD +vF+l+  g   + e+ v+
  ONIVA06G00810.2  61 IAKSHLHPKFQMWIPPRFQ--HRLAEPEARTAAVLHSGGKSWATSY--CGHLKMKKLDAGWSEFAVDNRLLVGDACVFELVamGAaGGLEFQVQ 150
                      34566667799*******6..6666778889***************..*******************************764466677777777 PP

                      EE- CS
               B3  96 vfr 98 
                      ++r
  ONIVA06G00810.2 151 ILR 153
                      766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MELDTDPTKL KAKPIIKPKV EPCDDDDELP PPPPPPASGS GEDWEATTPL AAGNPFFTAL  60
IAKSHLHPKF QMWIPPRFQH RLAEPEARTA AVLHSGGKSW ATSYCGHLKM KKLDAGWSEF  120
AVDNRLLVGD ACVFELVAMG AAGGLEFQVQ ILRGGLPAEV VTSKGLTSDQ PILIVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-07B3 family protein