PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G01850.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 214aa    MW: 23046.4 Da    PI: 4.6894
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G01850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-183283155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr++   grWv+e+r+p   +k+ r++lg+f tae Aa+a++ a+++l+g
  ONIVA06G01850.1 32 PVYRGVRRRGPAGRWVCEVREP---NKKSRIWLGTFATAEAAARAHDVAALALRG 83
                     68****************9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEYDEQEEYA TVTSAPPKRP AGRTKFRETR HPVYRGVRRR GPAGRWVCEV REPNKKSRIW  60
LGTFATAEAA ARAHDVAALA LRGRGACLNF ADSARLLRVD PATLATPDDI RRAAIELAES  120
CPHDAAAAAA SSSAAAVEAA AAAAPAMMMQ YQDDMAATPS SYDYAYYGNM DFDQPSYYYD  180
GMGGGGEYQS WQMDGDDDGG AGGYGGGDVT LWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.18e-32ERF family protein