PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G03340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 235aa    MW: 25698.2 Da    PI: 7.7663
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G03340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-105491544
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     T+eEd +++ a++ +G++  + Ia+ +  gRt++ +k+++
  ONIVA06G03340.1 54 TEEEDRIIIAAHAIHGNK-RACIAKLLD-GRTDNAIKNHL 91
                     9*****************.*********.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MGEGDAGQES YHAMSKSRPP DQYWMDGQDL CRKPAWKSAT RAKSPPIDFE AHETEEEDRI  60
IIAAHAIHGN KRACIAKLLD GRTDNAIKNH LEFYSEAALR AKEELAGDEL HLSVVIVPAI  120
PALGSGCARS SVIHVISTDA RERRRFGRWA ISSARLPVEW IPSSERSPSL VSATALSSSA  180
FAFAAALHVL PPPLRPSLAV IAIDRTTIYE DAGRRRTLHL HHAATPSPHL TPSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.14e-13MYB family protein