PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G05510.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 357aa    MW: 39237.1 Da    PI: 6.3945
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G05510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.83e-16107153455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hn  E+rRR++iN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  ONIVA06G05510.1 107 VHNLSEKRRRSKINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 153
                      6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MDEQRGRGGF DELVLLHQQQ EQRRRREQQQ EEEEEEEVRR QMFGAVVGGL AAFPAAAAAL  60
GQQQVDCGGE LGGFCDSEAG GSSEPEAAAG ARPRGGSGSK RSRAAEVHNL SEKRRRSKIN  120
EKMKALQSLI PNSNKTDKAS MLDEAIEYLK QLQLQVQMLS MRNGVYLNPS YLSGALEPAQ  180
ASQMFAALGG NNVTVAHPGT VMPPVNQSSG AHHLFDPLNS PPQNQPQSLI LPSVPSTAIP  240
EPPFHLESSQ SHLRQFQLPG SSEMVFHGEI MPKHHLSSHQ ESLPAFVKIS VHFTNTHTPL  300
VFVLFADFCL HPLKGNEMNS IRKESSMLNT NNFDVKNDNE MDVVAGGIEI RCERRMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-34bHLH family protein