PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G05630.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 186aa    MW: 19780.2 Da    PI: 11.1922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G05630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75e-174695255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr +k +g+WvAeIr+p   +kr r++lg++ ta  Aa+a++ a  +l+g
  ONIVA06G05630.1 46 QYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVFYLRG 95
                     69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDRREATVFM PPPPPPPPPT QPQPPQAAAA AVRATVGGRG GGGGRQYRGV RMRKWGKWVA  60
EIREPNKRSR IWLGSYSTAV AAARAYDTAV FYLRGRSARL NFPDQLDGAG GGGGSGGGAE  120
DHRELTAAAI RKKAAEVGAR VDAQHSVVGA AAPVPLQPPQ PPPPQRRRTK NPDLNREPTP  180
DTSDDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13744GGRGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36900.17e-30ERF family protein