PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G07220.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 189aa    MW: 20988.4 Da    PI: 6.6792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G07220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-174796255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr +  +g+WvAeIr p++   rkr++l +++++e+Aa+a +aa  +l+g
  ONIVA06G07220.1 47 KYRGVRLRQ-WGKWVAEIRLPNS---RKRIWLRSYDSPEKAARAFDAAFICLRG 96
                     8*****998.**********933...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MDQTALEHMA TNLASHLRAR GSHICEPSSY APIKRANGTS PAPVERKYRG VRLRQWGKWV  60
AEIRLPNSRK RIWLRSYDSP EKAARAFDAA FICLRGGEAI AGLNFPESPP TVVARTSDPR  120
EVLAYATSHA NRLSSDATIA QEEAALVAGG SFDWSQLPLY SPMTTPTAEH WEEDNVEATT  180
SDNLWSFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-34ERF family protein