PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G09300.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 87aa    MW: 9746.99 Da    PI: 9.335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G09300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.93.6e-0815541554
                     HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +iN+ +++L++llP++ + ++   s    L++++ YIksL
  ONIVA06G09300.1 15 EINELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSL 54
                     7**************7567777799999***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSSRRSSRSS VSEEEINELI SKLQSLLPSS RRRGANQAST TKLLKETCSY IKSLHREVDD  60
LSDRLSDLMA GMDHNSPGAE IIRSLLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.14e-27bHLH family protein