PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G16260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 214aa    MW: 22092.8 Da    PI: 6.4241
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G16260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer49.11.4e-1561111453
      ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFH 53 
                      ++Y+eC kNhAaslGgh     +   +  g e +++++l CaACgCH nFH
  ONIVA06G16260.1  61 TVYQECPKNHAASLGGHGAGRLRGVHAVVGGEpADPTSLMCAACGCHCNFH 111
                      78****************999999999888888****************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MKLSTFATAA AAAADRSRGG GGKHGVRAAS CVGATGGVIA GDMAEVELLR RAQPAVGGGE  60
TVYQECPKNH AASLGGHGAG RLRGVHAVVG GEPADPTSLM CAACGCHCNF HCWLLEGSPP  120
PPPPLALPGP PMPANVLHGQ LHREEETPEV RLPRVDGDES DNNSDGSEYY DERSVSPPSP  180
PHLPAPVVHQ PYYPSAQHML LSLGSSGQAQ RLPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.17e-10ZF-HD family protein