PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G21600.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 365aa    MW: 39113 Da    PI: 10.0455
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G21600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind90.22.6e-28121382102
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT..................... CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks..................... 74 
                      F+ k+y+++ed+ ++ +i w + +nsfvv d+  f++++Lp +Fkh+nf+SFvRQLn+Y    + ++ ++s++                     
  ONIVA06G21600.1  12 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYVSLVTPSSISSSHHtpplsalhimlpwilsgtqlk 105
                      9**********************************************************766555555554448999****9999999998887 PP

                      .....XTTSEEEEESXXXXXXXXXXXXXXXXXX CS
     HSF_DNA-bind  75 .....kekiweFkhksFkkgkkellekikrkks 102
                           +++ weF+h sF +g+++ll++i r+ s
  ONIVA06G21600.1 106 gfrkvDPDRWEFAHASFLRGQTHLLRNIVRRGS 138
                      7765449***********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MAAAAGGGAA PFVWKTYRMV EDPGTDGVIG WGKGNNSFVV ADPFVFSQTL LPAHFKHNNF  60
SSFVRQLNTY VSLVTPSSIS SSHHTPPLSA LHIMLPWILS GTQLKGFRKV DPDRWEFAHA  120
SFLRGQTHLL RNIVRRGSAA AGGGGGGGGG GKRRDATADG GGGGGEEDMT MVATEVVRLK  180
QEQRTIDDRV AAMWRRVQET ERRPKQMLAF LLKVVGDRDK LHRLVGGGGN GAAATAAAAV  240
VDNNGFADAA RVGCGEKRAR LLLDGDNTGA FGPDAVDFAG LYTGADMFPD VAVDAAAGYN  300
LTVNLVKEFF DIFLQIRSNN TIQSEGVDNI NRWRWTNNGM PVQSRHTTQF NGRVDSVAAK  360
QISKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-48HSF family protein