PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G22540.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 347aa MW: 38087.6 Da PI: 4.9346

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G22540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	99.3	3.5e-31	43	135	2	102
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl k++e++ed++++ ++sw + nsfvv+d++ fa ++Lp +Fkh nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++ll ONIVA06G22540.1 43 FLVKTFEMVEDPATDAVVSWGgAARNSFVVWDPHAFAARLLPLHFKHANFSSFLRQLNTYGFRKVSADR---------WEFANEDFLGGQRHLL 127 9******************9899**************************************99.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +i+r+++ ONIVA06G22540.1 128 ANIRRRRR 135 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDYSTVKQEV VEVVVLDGEE EGEAAAPVPL PAAMGVVAAV APFLVKTFEM VEDPATDAVV 60 SWGGAARNSF VVWDPHAFAA RLLPLHFKHA NFSSFLRQLN TYGFRKVSAD RWEFANEDFL 120 GGQRHLLANI RRRRRGAGTG STTPRTVNGG AGGSEGEVER LRRDKEALAR ELARLRRQQQ 180 EARAQLLDME RRVRGTERRQ EQCTAFLARA LRSPDVLDNI ARRHAAAVER KKRRMLAAAA 240 DDDGLTFEAL ALAAAADTSH STGGAVTTDM IWYELLGEEQ AEIDIEVDQL VASASAAADT 300 ASEAEPWEEM GEEEVQELVQ QIDCLASPRS SDGLIRSTPS ISQRKSF

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDYSTVKQEV VEVVVLDGEE EGEAAAPVPL PAAMGVVAAV APFLVKTFEM VEDPATDAVV  60
SWGGAARNSF VVWDPHAFAA RLLPLHFKHA NFSSFLRQLN TYGFRKVSAD RWEFANEDFL  120
GGQRHLLANI RRRRRGAGTG STTPRTVNGG AGGSEGEVER LRRDKEALAR ELARLRRQQQ  180
EARAQLLDME RRVRGTERRQ EQCTAFLARA LRSPDVLDNI ARRHAAAVER KKRRMLAAAA  240
DDDGLTFEAL ALAAAADTSH STGGAVTTDM IWYELLGEEQ AEIDIEVDQL VASASAAADT  300
ASEAEPWEEM GEEEVQELVQ QIDCLASPRS SDGLIRSTPS ISQRKSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-48	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G22540.1