PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G22870.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 387aa    MW: 40756.4 Da    PI: 9.6834
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G22870.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.51.5e-17200233134
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                      Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  ONIVA06G22870.2 200 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 233
                      *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MSTIYMSQLS AALPLMEGEH HQDHHQGHFQ AFSLQPKDPP VLFPFVINRR SSSSSPSDST  60
TLSYGSDHHL TQQQQHQHQA MLEPQHMIGG SSAGIFATPF PTVKSIRDDM IERSQFDPYD  120
TEKLQASCGL AKVVAGGKWS AVPAAKMKIT RKMGEPSSGV TGGAATTVAP KKPRRRLAQA  180
YEDHGHGGAM GQAFGVIRVC SDCNTTKTPL WRSGPCGPKS LCNACGIRQR KARRAMMASG  240
LPASPNAAGP KAAAHSGAAA VAAAQPKVKK EKRADVDRSS LPFKKRCKAV QVEDHQTLPA  300
ATNAAAAAAM EETAESATVA PPPAPTTRGC TLVDSIGLSW SKTHAAATAS CSFRPSPVAP  360
GFAAAVQDEI TDAAMLLMTL SCGLVRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170177PKKPRRRL
2230272RKARRAMMASGLPASPNAAGPKAAAHSGAAAVAAAQPKVKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-19GATA family protein