PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G24740.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 325aa MW: 34316.5 Da PI: 8.2799

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G24740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.8	4.6e-09	156	203	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++e L+el+P +s k a +L + +++++sLq ONIVA06G24740.1 156 SHSLAERARREKINARMELLKELVPGCS----KVSGTALVLDEIINHVQSLQ 203 8*************************94....22445556666666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MHHHSPPPPP DLSSAVGEIH PPLASAARSS SNGGGSGGSF TALLGLPTSQ AMELLLPTAA 60 ASAPPPPPAF PADPHLVDRA ARFSAFASPS PPSPPPPPPP PPSSSSKRKP DPASKGKAAA 120 KKGKTAASGE DGGDGGEDEK PAYVHVRARR GQATDSHSLA ERARREKINA RMELLKELVP 180 GCSKVSGTAL VLDEIINHVQ SLQRQVEYLS MRLAAVNPRV DFGGLDNFLT TECGRITGLN 240 YKNGMDLEQV TWPDMGVHGA RNLMQLQQQF WHGDLAHPLQ PPSQWEKRTD TNPPVFSNSS 300 SSLFGYDLAS SGAPAQTGNK LKTEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.2	7e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G24740.1