PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G28540.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 189aa    MW: 20046.4 Da    PI: 6.5253
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G28540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-171665255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr ++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++ a+++l+g
  ONIVA06G28540.1 16 RYRGVRKRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEVAARAYDDAARSLRG 65
                     59*******.7*********83...36*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MRKSKQPQPQ PSPEIRYRGV RKRPSGRYAA EIRDPAKKTP IWLGTFDSAE VAARAYDDAA  60
RSLRGPTART NFPLAAPSAP PPRPPPPAAA AAATSSHSST VESWSGGAPR AAASALARSA  120
APMEATQEED CHSYCGSSSS VLCEDGSDDA AASRTPLPFD LNMPPPEEEL DMAAVADQMG  180
IRYDTLLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.19e-20ERF family protein