PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G30350.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 192aa    MW: 20803.7 Da    PI: 4.5273
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G30350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.61.1e-1766121359
                      -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      DgynWr  GqK v+g  + + YY C++a+C + k v rsa d+++ +++ +g+Hnh+
  ONIVA06G30350.1  66 DGYNWRMCGQKLVQGGCHQKFYYECSQANCGAEKSVTRSA-DGQIKKTVCKGSHNHP 121
                      9***************************************.***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MENNQSGQAQ DGMADQRFRS WLTEQLNMQQ QNAGCSSNPA PAVMQMPALP SHTDYGGIYP  60
NPTEYDGYNW RMCGQKLVQG GCHQKFYYEC SQANCGAEKS VTRSADGQIK KTVCKGSHNH  120
PRSSERVFGD GSATLDAIPV GEILQAAGVI RPSVAMPRNE EEDGLQSGSS DSEDDDASEA  180
RAAGDDNAIR CY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01080.12e-16WRKY family protein