PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G30800.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 345aa MW: 37762.7 Da PI: 4.4694

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G30800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	155	197	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L ONIVA06G30800.1 155 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 197 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MELDEQAFLE ELFSLRRDAW EYNAMGDFFS PACAAMDGFQ ERHQSTTTVS VLPTFTASYE 60 QPPPAPAAGF DCLSEVYGNA AAAFGPNAGG EYGGGGDMGF LDVVEPKASM VVDGGGLGVC 120 KVEPGLQAEG GFSAAAAAPA SKKKRVEGMP SKNLMAERRR RKRLNDRLSM LRSVVPKISK 180 MDRTSILGDT IDYMKELLER IRQLQEEIEE QQQQETPGVL SVFRELNPNE MLARNTPKVA 240 ASIHCWIYNE EDDGINGVCE VQFDVERKEG GDTRVEIYCA AKPGLLLSTV STLETLGLDI 300 QQCVVSCFND FGMHASCSEM QRERMSADMI KQELFKNAGY GGGCL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MELDEQAFLE ELFSLRRDAW EYNAMGDFFS PACAAMDGFQ ERHQSTTTVS VLPTFTASYE  60
QPPPAPAAGF DCLSEVYGNA AAAFGPNAGG EYGGGGDMGF LDVVEPKASM VVDGGGLGVC  120
KVEPGLQAEG GFSAAAAAPA SKKKRVEGMP SKNLMAERRR RKRLNDRLSM LRSVVPKISK  180
MDRTSILGDT IDYMKELLER IRQLQEEIEE QQQQETPGVL SVFRELNPNE MLARNTPKVA  240
ASIHCWIYNE EDDGINGVCE VQFDVERKEG GDTRVEIYCA AKPGLLLSTV STLETLGLDI  300
QQCVVSCFND FGMHASCSEM QRERMSADMI KQELFKNAGY GGGCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	163	KKKRVEGMPSKNLMAERRRRKR
2	143	164	KKKRVEGMPSKNLMAERRRRKR
3	157	164	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	6e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G30800.1