PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G31020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 184aa MW: 20280.6 Da PI: 7.3771

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G31020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp C+++F++ + H+r+H ONIVA06G31020.1 56 YPCPLCDRHFPTEKAVHGHMRSH 78 99********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MAGQVFVHHL GGGSGGDDPT HPWLSLKSSH EMDDAVASWR EKLADMAAAD ERTGRYPCPL 60 CDRHFPTEKA VHGHMRSHPG RGWRGMEPPR EPSPGDLALA ADGKRYRYVC DRCKAPFETR 120 QALGGHRASH STKKGCSWHA KQLAMAKPPK NDFDLNHLSL EAIQAAAQEE QAAQEGNKDE 180 EPKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	5e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G31020.1