PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G01070.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 512aa MW: 55121.7 Da PI: 6.4458

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G01070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.1	6.6e-18	327	373	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq ONIVA07G01070.1 327 VHNLSERRRRDRINEKLRALQELVPHC-----NKTDKASILDEAIEYLKSLQ 373 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MVRDVPKQAG QKKKIRRFVN PSSPPPYKNA TDTSPSFFLR FNFPDEIEPN YNYPSISSTR 60 HLTLLPRHSH FLSTSKRSKK NEVSVTCRLS KNCGAMDAGA TARSSSSSAM MMNQKKPLLS 120 DGELVELLWQ DGGVVAHAQT RHRSSDVLAR SGVTGEEETA SAWFADGGGA GGGGDDALGV 180 GMGRDIYSQL WHSFANVDGH AAGALALATP TPTPRAAARS DDVSSRLDEA GLSICGSNAV 240 VAPALPADDD DDIDAAAPRE EEEEEEGPGA ARAAGASSSG GSGSGSGSYP LFKRGREELV 300 DSLSEVADET RPSKRPAAKR RTRAAEVHNL SERRRRDRIN EKLRALQELV PHCNKTDKAS 360 ILDEAIEYLK SLQMQVQIMW MTTGIVPMMF PGTHQLMPPM GMGLNTACMP GAQAQGLNQM 420 QRTTYYMNNS LPNQMPQIPS PAMNAPSVPD DMQNDNRIRG PRNPFLHCND TLTATAQVPG 480 LFTYGSQIAE QNEIQELLSG AVIPSSSDGT IK

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MVRDVPKQAG QKKKIRRFVN PSSPPPYKNA TDTSPSFFLR FNFPDEIEPN YNYPSISSTR  60
HLTLLPRHSH FLSTSKRSKK NEVSVTCRLS KNCGAMDAGA TARSSSSSAM MMNQKKPLLS  120
DGELVELLWQ DGGVVAHAQT RHRSSDVLAR SGVTGEEETA SAWFADGGGA GGGGDDALGV  180
GMGRDIYSQL WHSFANVDGH AAGALALATP TPTPRAAARS DDVSSRLDEA GLSICGSNAV  240
VAPALPADDD DDIDAAAPRE EEEEEEGPGA ARAAGASSSG GSGSGSGSYP LFKRGREELV  300
DSLSEVADET RPSKRPAAKR RTRAAEVHNL SERRRRDRIN EKLRALQELV PHCNKTDKAS  360
ILDEAIEYLK SLQMQVQIMW MTTGIVPMMF PGTHQLMPPM GMGLNTACMP GAQAQGLNQM  420
QRTTYYMNNS LPNQMPQIPS PAMNAPSVPD DMQNDNRIRG PRNPFLHCND TLTATAQVPG  480
LFTYGSQIAE QNEIQELLSG AVIPSSSDGT IK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	17	QKKKIRR
2	319	336	KRRTRAAEVHNLSERRRR
3	332	337	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-27	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G01070.1