PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G02310.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family YABBY
Protein Properties Length: 215aa    MW: 23794.1 Da    PI: 11.3355
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G02310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY109.85e-3411031111
            YABBY   1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesast 94 
                      ++v+++se+vCyv+Cn+Cntil+v+vP+++++++vtvrCGhCt++ls++la ++q++++++h        ++++++++++n+ s+++++++++t
  ONIVA07G02310.1   1 MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDH--------QVQNRGFQGNNFGSYDIASRNQRT 86 
                      57999********************************************************9........99********************** PP

            YABBY  95 svsseklsenedeevpr 111
                      s++++ +++++++ + +
  ONIVA07G02310.1  87 STAMYPMPTSQQQPLRK 103
                      *******9999987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSVQFTSEHV CYVNCNYCNT ILVVNVPNNC SYNIVTVRCG HCTMVLSMDL APFHQARTVQ  60
DHQVQNRGFQ GNNFGSYDIA SRNQRTSTAM YPMPTSQQQP LRKDSVSHLH TTDSSRRRYR  120
GLKPAILRLA TGRHSVLLQR TGLIFPGSIL ASALPTAAAA AAAATNRGGA ACRPATDRRR  180
ARRRAAAAGR ECARRRDDDD ILLSRVPLSL RRVIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178196RRRARRRAAAAGRECARRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-16YABBY family protein