PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G03590.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 789aa MW: 85089.8 Da PI: 6.4988

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G03590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5e-16	466	504	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk ONIVA07G03590.1 466 ACKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 504 589**********************************96 PP
2	TCR	50.9	3.1e-16	552	591	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce+CkN+ ONIVA07G03590.1 552 RHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCEGCKNTF 591 589***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MDTPDRAAAA ARAEDSPLFS FIDSLSPIEP LKSAYSASSI QAYQSLNITS ISSIFTSPHD 60 NAQKESKLSK SSFAEFSESE VCADESDKNK PSKSSNAVRL FACTSTLTQA THKITSSVSE 120 GTVGPPEGSN DLPQPGQFDS GSPDHNTTPC HGVRSDLKQG KCRKLQAFQT AKTNTSEKRK 180 CLFSTEVQLM DGCQPEKLND EILGCDWDDL ISATSGELIA YDEDHKGVQL AVSNAESCGF 240 LLSKLTGDGD ISDRTHPSSS TQTYYRELLM DEDQTENAQL VPDGEKNIST EEIQDNLYEA 300 NGSIPTGYKV ETQQQRGMRR RCLVFEAAGY SNRIVQKESV MDLSVSTCKG KSPVQNHSNP 360 GKTPSPRVLR GIGLHLNALA LTSKDKMICQ DPMSSLVPSS ATQQEAHGKM LSAGENFIHP 420 GGELLELQMD DDCSAGVFLG NDHDSSQSNS PQKKRRKSDN GDDGEACKRC SCKKSKCLKL 480 YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI RMSDAGQDIT 540 GEDPNNTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSS NCRCEGCKNT FGKRDAAVST 600 EAEEMKQGGE EAENCGKEKE NDLQKANAQS EDHPFLELVP ITPPFDVSSS LLKPPNFSSA 660 KPPRPTKARS NSSRSSSKAP GAVHSQKFSK IANSGLNEEM PDILRDDASP GNCVKTSSPN 720 GKRVSPPHNA LSVSPSRKGG RKLILKSIPS FPSLIGDASS GSSMNSSESA FNTASPLALD 780 VRLYTSLLT

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MDTPDRAAAA ARAEDSPLFS FIDSLSPIEP LKSAYSASSI QAYQSLNITS ISSIFTSPHD  60
NAQKESKLSK SSFAEFSESE VCADESDKNK PSKSSNAVRL FACTSTLTQA THKITSSVSE  120
GTVGPPEGSN DLPQPGQFDS GSPDHNTTPC HGVRSDLKQG KCRKLQAFQT AKTNTSEKRK  180
CLFSTEVQLM DGCQPEKLND EILGCDWDDL ISATSGELIA YDEDHKGVQL AVSNAESCGF  240
LLSKLTGDGD ISDRTHPSSS TQTYYRELLM DEDQTENAQL VPDGEKNIST EEIQDNLYEA  300
NGSIPTGYKV ETQQQRGMRR RCLVFEAAGY SNRIVQKESV MDLSVSTCKG KSPVQNHSNP  360
GKTPSPRVLR GIGLHLNALA LTSKDKMICQ DPMSSLVPSS ATQQEAHGKM LSAGENFIHP  420
GGELLELQMD DDCSAGVFLG NDHDSSQSNS PQKKRRKSDN GDDGEACKRC SCKKSKCLKL  480
YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR NPLAFAPKVI RMSDAGQDIT  540
GEDPNNTPAS ARHKRGCNCK KSSCLKKYCE CYQGGVGCSS NCRCEGCKNT FGKRDAAVST  600
EAEEMKQGGE EAENCGKEKE NDLQKANAQS EDHPFLELVP ITPPFDVSSS LLKPPNFSSA  660
KPPRPTKARS NSSRSSSKAP GAVHSQKFSK IANSGLNEEM PDILRDDASP GNCVKTSSPN  720
GKRVSPPHNA LSVSPSRKGG RKLILKSIPS FPSLIGDASS GSSMNSSESA FNTASPLALD  780
VRLYTSLLT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	453	457	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	5e-84	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G03590.1