PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G05030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 252aa    MW: 27377.3 Da    PI: 8.4929
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G05030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.1e-11134181455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+sLq
  ONIVA07G05030.1 134 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQSLQ 181
                      8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDPVPSLAAE LWRPHHHRHH LEASSVVTDQ GSGSRGGGGS GRRRPRRDAG PEDDDSSKVV  60
STSAASGGGQ DSVAPEAKRL KPMKSSDKND SLRTEAGTDS GNSSKAADKN ATPPEPPKQD  120
YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC NKVIGKASVL DEIINYIQSL  180
QHQVEFLSMK LEAVNSHMNN GIVAFPSKDF GAQPYNTAAG LTFDPQTTRE FAQGSTSEWL  240
HMQIGNAYER VT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-70bHLH family protein