PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G05980.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 178aa MW: 20640.6 Da PI: 10.1077

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G05980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	1e-15	14	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde l + v+ +G W+ Ia+ ++ t+kqc++rw ++l ONIVA07G05980.1 14 KGGWTREEDEVLRQMVRHHGDCKWTEIAKSLP-SQTGKQCRERWTNHL 60 688***************************.**********996 PP
2	Myb_DNA-binding	38.6	2.5e-12	67	105	6	46
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +eE+ +l+++++ +G++ W++I r ++ gR+++ +k++w+ ONIVA07G05980.1 67 EEEHMKLIEVHRTYGNR-WSAIVRWLP-GRSENTVKNHWNL 105 7**************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MQVAGSNDNL GLIKGGWTRE EDEVLRQMVR HHGDCKWTEI AKSLPSQTGK QCRERWTNHL 60 YSEIKIEEEH MKLIEVHRTY GNRWSAIVRW LPGRSENTVK NHWNLTKRSL NSKQRLRKKN 120 SEKAVPRQPS HLEEYICSFQ NPLLNETAPS PLAPPAPFDI VRYGTSRLIV VIPTPLVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-36	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G05980.1