PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G07180.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

FAR1

Protein Properties

Length: 431aa MW: 48124.8 Da PI: 9.2141

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G07180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	93.9	1.9e-29	116	205	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY+ YA ++GFsvr+++ +ks+++geit+r+fvCs+eg+++++k++ +++r++++ trtgC+a+l++++++ ++k+ev+ +e +HnH+l+ ONIVA07G07180.1 116 EFYRYYAWKLGFSVRREYANKSRKTGEITSRKFVCSREGFKAPDKRT-NHTRTPQPDTRTGCHANLVIRRKNdTSKYEVYAFEAQHNHPLF 205 6*****************************************999.******************9999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGLPDTAHLQ VSNLVAAAAT EGKKKDTRRQ QESTSPRRAA PPVAAGDELA LAGATPQPYT 60 CPSSSSARSL RWKESTGNTA VEDSEAGPCI PRVQAATGDY TPWLGQEFAS EHEAYEFYRY 120 YAWKLGFSVR REYANKSRKT GEITSRKFVC SREGFKAPDK RTNHTRTPQP DTRTGCHANL 180 VIRRKNDTSK YEVYAFEAQH NHPLFIPSCA NPLQRKLSDV QSSDADNSGS EFKACINDYE 240 EEVELFTAWE AMISKYNLHS NRRKKKGRNA KSQRKSCIEK GLQKTKKVQP EQSPIQYTML 300 DATQPGNVLF QGLDISNPFP MGQLNYGGVQ PQPGLCPSLP TVSRELGFAA YLSQPSSNSQ 360 HNQQKSTALL KVIVHICFNL QYNSWDKTGP VEDQINFSNS YQSVIEATKN SHLPGYIHQQ 420 HVHAMLRSTT S

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGLPDTAHLQ VSNLVAAAAT EGKKKDTRRQ QESTSPRRAA PPVAAGDELA LAGATPQPYT  60
CPSSSSARSL RWKESTGNTA VEDSEAGPCI PRVQAATGDY TPWLGQEFAS EHEAYEFYRY  120
YAWKLGFSVR REYANKSRKT GEITSRKFVC SREGFKAPDK RTNHTRTPQP DTRTGCHANL  180
VIRRKNDTSK YEVYAFEAQH NHPLFIPSCA NPLQRKLSDV QSSDADNSGS EFKACINDYE  240
EEVELFTAWE AMISKYNLHS NRRKKKGRNA KSQRKSCIEK GLQKTKKVQP EQSPIQYTML  300
DATQPGNVLF QGLDISNPFP MGQLNYGGVQ PQPGLCPSLP TVSRELGFAA YLSQPSSNSQ  360
HNQQKSTALL KVIVHICFNL QYNSWDKTGP VEDQINFSNS YQSVIEATKN SHLPGYIHQQ  420
HVHAMLRSTT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	4e-21	FAR1 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G07180.1