PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G07180.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

FAR1

Protein Properties

Length: 415aa MW: 46406.9 Da PI: 8.9759

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G07180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	94	1.8e-29	100	189	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY+ YA ++GFsvr+++ +ks+++geit+r+fvCs+eg+++++k++ +++r++++ trtgC+a+l++++++ ++k+ev+ +e +HnH+l+ ONIVA07G07180.2 100 EFYRYYAWKLGFSVRREYANKSRKTGEITSRKFVCSREGFKAPDKRT-NHTRTPQPDTRTGCHANLVIRRKNdTSKYEVYAFEAQHNHPLF 189 6*****************************************999.******************9999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MGLPDTAHLQ VSNLVAAAAT EGKKKDTRRQ QESTSPRRAA PPVAAGDELA LAGATPQPYT 60 CNTAVEDSEA GPCIPRVQAA TGDYTPWLGQ EFASEHEAYE FYRYYAWKLG FSVRREYANK 120 SRKTGEITSR KFVCSREGFK APDKRTNHTR TPQPDTRTGC HANLVIRRKN DTSKYEVYAF 180 EAQHNHPLFI PSCANPLQRK LSDVQSSDAD NSGSEFKACI NDYEEEVELF TAWEAMISKY 240 NLHSNRRKKK GRNAKSQRKS CIEKGLQKTK KVQPEQSPIQ YTMLDATQPG NVLFQGLDIS 300 NPFPMGQLNY GGVQPQPGLC PSLPTVSREL GFAAYLSQPS SNSQHNQQKS TALLKVIVHI 360 CFNLQYNSWD KTGPVEDQIN FSNSYQSVIE ATKNSHLPGY IHQQHVHAML RSTTS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MGLPDTAHLQ VSNLVAAAAT EGKKKDTRRQ QESTSPRRAA PPVAAGDELA LAGATPQPYT  60
CNTAVEDSEA GPCIPRVQAA TGDYTPWLGQ EFASEHEAYE FYRYYAWKLG FSVRREYANK  120
SRKTGEITSR KFVCSREGFK APDKRTNHTR TPQPDTRTGC HANLVIRRKN DTSKYEVYAF  180
EAQHNHPLFI PSCANPLQRK LSDVQSSDAD NSGSEFKACI NDYEEEVELF TAWEAMISKY  240
NLHSNRRKKK GRNAKSQRKS CIEKGLQKTK KVQPEQSPIQ YTMLDATQPG NVLFQGLDIS  300
NPFPMGQLNY GGVQPQPGLC PSLPTVSREL GFAAYLSQPS SNSQHNQQKS TALLKVIVHI  360
CFNLQYNSWD KTGPVEDQIN FSNSYQSVIE ATKNSHLPGY IHQQHVHAML RSTTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-21	FAR1 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G07180.2