PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G07670.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GATA

Protein Properties

Length: 137aa MW: 15626 Da PI: 10.2029

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G07670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.8	2.7e-17	22	55	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C+t+kT+ WR+gp g+k+LCnaCG++y +kg ONIVA07G07670.1 22 CSHCQTSKTSVWRNGPFGPKSLCNACGIRYHRKG 55 ******************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence
MEPESSLHKV VVPLDLNYPR ICSHCQTSKT SVWRNGPFGP KSLCNACGIR YHRKGIDALE 60 LEGKRSKDKK RKTSRNEVPL RRGLRKNNKN AKEVDFGVRM MMEGCQSEPM LTQGQQYEDD 120 VKKAAIQLMY LSRAANT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	70	KRSKDKK
2	69	89	KKRKTSRNEVPLRRGLRKNNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26930.1	3e-13	GATA family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G07670.1