PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G08430.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 175aa    MW: 19892.7 Da    PI: 8.5183
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G08430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS23.27.4e-08741263679
             GRAS  36 dpmqRlaayfteALaarlarsvselykalppsetsekn.........sseela 79 
                      +pm R++ayf++ALa r++r++++++++ +p+e +++          s++ ++
  ONIVA07G08430.1  74 TPMPRVVAYFAKALALRVVRMWPHMFEISAPWELTDDAfnsdddafnSDDDAM 126
                      89*****************************9999776655555555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MRSPPPLHAD STPARRRGEE MCEMGRVVRW ADKLFWRTME ATVKEHRRGG QRGGQGEEGE  60
AHCVRRDGFT GGPTPMPRVV AYFAKALALR VVRMWPHMFE ISAPWELTDD AFNSDDDAFN  120
SDDDAMALRI LNTITRAKTE TSPGRAKAEE MFVRERMCNG MVAATGVRLP ERRLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.12e-10GRAS family protein