PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G09500.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 239aa    MW: 25357.1 Da    PI: 9.8115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G09500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.3e-1777126355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + GVr+++ +gr++AeIrd + ng  +r+++g+f++ae Aa a+++a+++ +g
  ONIVA07G09500.1  77 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWIGTFDSAEAAAMAYDQAALSARG 126
                      57******.**********44465..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MAEHFSHAGM YIGYTADAAA SSSSSSSSSS SSSSEMLRFD TGWPDETPAP SSVAGRRRSA  60
GGDHRQGRGQ TEAAAAFIGV RRRPWGRFAA EIRDSTRNGA RVWIGTFDSA EAAAMAYDQA  120
ALSARGAAAA LNFPVERVRE SLHALSLGAA GGSPVLALKR RHSKRKRRKK AELLAAAAAT  180
AATANATPQT RRISKSTELT TATTDEQKRF VVELEDLGAE YLEELLWLSE INGGSDPAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160166RRHSKRK
2164169KRKRRK
3164170KRKRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-22ERF family protein