PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G09950.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 135aa    MW: 15791.1 Da    PI: 11.4109
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G09950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.3e-082568348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     ++T+ +d+ l++++ +lG + Wk I r +  gRt    k+rw+ ++
  ONIVA07G09950.1 25 PFTARDDDELLRLHYRLGDR-WKEIGRAVY-GRTSRVMKHRWRELR 68
                     79****************99.********9.***********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MPRRSARSCR DSWRHHLARD VYHRPFTARD DDELLRLHYR LGDRWKEIGR AVYGRTSRVM  60
KHRWRELRRG GFLAAAARKE QAIDMVESEV EESADQSLPA PELQPPLSRT LLPRALVIAA  120
LPMSTRWIPW PAASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.17e-15MYB family protein