PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G10030.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HB-other

Protein Properties

Length: 250aa MW: 28187.3 Da PI: 5.1594

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G10030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66	5.1e-21	56	107	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++t++q++ Le++Fe++ y+ ++r eLAkklg++erqVk+WFqNrR+++k ONIVA07G10030.1 56 KRHTDDQIKHLESVFERCTYLGGNQRVELAKKLGMEERQVKFWFQNRRTRKK 107 579***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MDNGSQQESS DLHVHHLPIA SVIGVEDHTE EADDAAVDYH DDGSEGQDEV SNKRMKRHTD 60 DQIKHLESVF ERCTYLGGNQ RVELAKKLGM EERQVKFWFQ NRRTRKKMHD ERQEGMWLQE 120 ENDVLHAENK VLKEAIWANI CFTCGSPVVP AIPTVHHRYL SFQNMRLADE LQHATAVFNM 180 VAQDADVGLP PVFPLTDVSP LPQFGFVTGN NQTSLVIDPP SPSHSENQVS TESANSTSTC 240 PRLFILSGRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61150.1	2e-31	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G10030.1