PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G15940.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 256aa    MW: 27903.7 Da    PI: 5.9248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G15940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-1196143454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++  rE+ RRd++N++f eL  +l +    + +K++K++iL  A++ + +L
  ONIVA07G15940.2  96 SKACREKVRRDKLNERFLELGAVLEPG---KTPKMDKSSILNDAIRVMAEL 143
                      6789**********************9...9**************998777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MASPEGSTWV FDCPLMDDLA TAAGFDAAPA GGFYWTTPAP PQAALQPPPP QQQPVAPATA  60
APNACAEING SVDCEHGKEQ PTNKRPRSES GTRPSSKACR EKVRRDKLNE RFLELGAVLE  120
PGKTPKMDKS SILNDAIRVM AELRSEAQKL KESNESLQEK IKELKAEKNE LRDEKQKLKA  180
EKESLEQQIK FLNARPSFVP HPPVIPASAF TAPQGQAAGQ KLMMPVIGYP GFPMWQFMPP  240
SDVDTTDDTK SCPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-75bHLH family protein