PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G16350.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 228aa MW: 24977.9 Da PI: 4.6598

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G16350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.3e-06	66	105	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + e+ErrRR r+N ++ Lr ++ k ++L A+e+Ik+Lq ONIVA07G16350.1 66 NLEAERRRRGRLNGNIFALRAVMSKE-----------ATLSDAIEHIKNLQ 105 5689***************99886...........6*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MPRRARARGS GGGGGEEVKV EDDFVDSVLN FGGGGGGEED GDDGEEEQQQ QQAAAAAMGK 60 EFKSKNLEAE RRRRGRLNGN IFALRAVMSK EATLSDAIEH IKNLQNEVLE LQRQLGDSPG 120 EAWEKQGSAS CSESFVPTEN AHYQGQVELI SLGSCKYNLK IFWTKRAGLF TKVLEALCSY 180 KVQVLSLNTI SFYGYAESFF TIEVKGEQDV VMVELRSLLS SIVEVPSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-16	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G16350.1