PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G17710.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

YABBY

Protein Properties

Length: 128aa MW: 13248.9 Da PI: 5.6097

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G17710.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	65.1	2.7e-20	12	128	6	134
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 e++ vqC+fC t+l+vsvP +s+++vv+v+CGhC+ +ls ++ ++a+ + l+ +el + +e++ + + + ONIVA07G17710.1 12 LRERLGCVQCSFCATVLLVSVPCSSVLRVVAVQCGHCSGILS-AVNLPPSPVSASIE----LT---PQELDAGPPPGEYSDESSGDDR-EGR-- 94 5689999*********************************.33322222222222....22...2333333333332222222222.222.. PP YABBY 100 klsenedeevprvpp.virPPekrqrvPsaynrfik 134 + ++d +p + +++PP ++qr Psayn+f+k ONIVA07G17710.1 95 --DAEDDAPAPAAAAvANKPPGRKQRTPSAYNCFVK 128 ..334444444444438***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MSSAARHHCS GLRERLGCVQ CSFCATVLLV SVPCSSVLRV VAVQCGHCSG ILSAVNLPPS 60 PVSASIELTP QELDAGPPPG EYSDESSGDD REGRDAEDDA PAPAAAAVAN KPPGRKQRTP 120 SAYNCFVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-06	YABBY family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G17710.1