PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G18960.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 311aa    MW: 34329.7 Da    PI: 6.2337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G18960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-102352751055
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  ONIVA07G18960.1 235 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 275
                      9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAQFLGAHGD HCFTYEQMDE SMEAMAAMFL PGLDTDSNSS SGCLNYDVPP QCWPQHGHSS  60
SVTSFPDPAH SYGSFEFPVM DPFPIADLDA HCAIPYLTED LISPPHGNHP SARVEEATKV  120
VTPVATKRKS SAAMTVCPCK YLNRTVIYFS YHAVLFSMPN WIDELIQASK KSKKAGKKDP  180
IGSDEGGNTY IDTQSSSSCT SEEGNLEGNA KPSSKKMGTR ANRGAATDPQ SLYARKRRER  240
INERLRILQN LVPNGTKVDI STMLEEAVQY VKFLQLQIKL LSSDDMWMYA PIAYNGVNIS  300
NIDLNISSLQ K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-38bHLH family protein