PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G19010.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 151aa MW: 16202.8 Da PI: 7.7861

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G19010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00061	68	90	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C F++ L H+r+H ONIVA07G19010.1 68 HKCSICRLEFPSGQALGGHMRVH 90 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MGDVKGVGVD TLELVKPSQR AYECSVCGKV YWCYQALGGH MTCHRNLFAQ VVAGDELSSD 60 GTMVVKGHKC SICRLEFPSG QALGGHMRVH YVCGVEGGSV KEKNVVKTKV TGALKLVLKD 120 FDLNVPVVAT MVGDEAESSH SEAKARMMTL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	9e-20	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G19010.1