PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G19100.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 199aa    MW: 20095.5 Da    PI: 8.1561
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G19100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.000614567123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ Cgk F +   L  H  +H
  ONIVA07G19100.1 45 FRCSLCGKAFASYQALGGHKASH 67
                     89**********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEQGGGAADG GDLISLCLMA LAAAARGEST ALALALAPPP PELHFRCSLC GKAFASYQAL  60
GGHKASHRKP SAAAAAPPAH RDVVVAAAPA SSGGVAADAD AASEADGRRR RHVCSLCRRG  120
FATGQALGGH KRFHYLHGPS VSATVSSAAT AASVGAAFDL NVAPIKEIAG EQRRCGEEAD  180
DDDEAESPSP AKKPRRRPG