PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G19920.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 143aa    MW: 15829.6 Da    PI: 10.1824
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G19920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.7e-092672543
                     -HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksr 43
                     T +Ed ++  + + +G+          +W+ Ia++++ gRt++++k++
  ONIVA07G19920.1 26 TDQEDRIICSLYNSMGSTyslrawtnrRWSIIASKLP-GRTDNDVKNH 72
                     899*************99*******************.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MNRCGKSCRL RWLNYLHLGI KHSGYTDQED RIICSLYNSM GSTYSLRAWT NRRWSIIASK  60
LPGRTDNDVK NHHQPPPQQQ HHHHHHHNHR VTGGGARVTL VSPPPTPQSQ YASMQPSSAS  120
ASSSGGNACS FGAATMYSPS PST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.11e-25MYB family protein