PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G20310.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YB
Protein Properties Length: 224aa    MW: 23258.7 Da    PI: 7.0774
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G20310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.39.7e-5821116297
            NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                      reqdrflPianvsrimk++lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedy++plk+yl+k+releg
  ONIVA07G20310.1  21 REQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEG 114
                      89******************************************************************************************** PP

            NF-YB  96 ek 97 
                      ek
  ONIVA07G20310.1 115 EK 116
                      97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MPDSDNESGG PSNAGEYASG REQDRFLPIA NVSRIMKRAL PANAKISKDA KETVQECVSE  60
FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFEDYID PLKLYLHKFR ELEGEKAIGA  120
AGSGGGGAAS SGGSGSGSGS HHHQDASRNN GGYGMYGGGG GMIMMMGQPM YGSPPASSAG  180
YAQPPPPHHH HHQMVMGGKG AYGHGGGGGG GPSPSSGYGR QDRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.17e-71NF-YB family protein