PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G22640.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 261aa MW: 29367 Da PI: 7.6968

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G22640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.1	2e-05	35	83	1	53
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r ++erE+ Rd+ N+ f+eL ll ++ + + Ka +L ++++ +k+ ONIVA07G22640.1 35 KRIHKSEREKLKRDKQNDLFNELGNLLEPD----RQNNGKACVLSETTRILKD 83 68899**********************997....4556666677666666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MVPRDRVNAA AGGGVEGRLV QSGIVNKKCD KKAPKRIHKS EREKLKRDKQ NDLFNELGNL 60 LEPDRQNNGK ACVLSETTRI LKDLLSQVES LRKENSSLKN ESHYVALERN ELHDDNSMLR 120 TEILELQNEL RTRMEGNPVW SHVNTRPALR VPYPTTGVFP VQHLPHLPVT TTGAFPQQQP 180 VIIEQHYAAT PRELQLFPES ATSEDSEPSQ QHGISDHVTR PQPRYPTPTA TLPVNLFPVL 240 PGRQDQQCSS GTSDEDRIGR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	1e-36	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G22640.1