PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G23600.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 315aa    MW: 34874.2 Da    PI: 7.085
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G23600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.92.2e-35391312103
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                      Fl+k+y++++d+ +++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll 
  ONIVA07G23600.1  39 FLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLLA 123
                      9****************************************************************999.........***************** PP

                      XXXXXXXX CS
     HSF_DNA-bind  96 kikrkkse 103
                      +i+r+ks+
  ONIVA07G23600.1 124 EIHRRKSS 131
                      *****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAFLVERCGE MVVSMEMGPH GGVGGGGGAA AGKPVPAPFL TKTYQLVDDP CTDHIVSWGE  60
DDTTFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVADRWEFA NEFFRKGAKH  120
LLAEIHRRKS SQPPPPPMPH QPYHHHHHHL NPFSLPPPPP AYHHHHLIQE EPATTAHCTV  180
AGDGGEGGDF LAALSEDNRQ LRRRNSLLLS ELAHMKKLYN DIIYFLQNHV APVTTTTTTP  240
SSTAMAAAQH HLPAAASCRL MELDSPDHSP PPPLPKTPAT DGGDTVKLFG VSLHGRKKRA  300
HRDDDDGVHD QGSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.16e-70HSF family protein