PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G00050.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 360aa MW: 39635.2 Da PI: 7.5281

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G00050.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.2	6.1e-13	253	337	3	83
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS...-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg...rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 k+lt+sdv++ gr+vlpkk ae+ + ++ + l + d +W++k++y ++ks++y+l eF k +gL++gD+++++ ONIVA08G00050.2 253 KELTKSDVGNVGRIVLPKKDAEASlpPLLQRDPLILHMDD--MvlpVTWKFKYRYwpNNKSRMYILD-SAGEFLKTHGLQAGDVIIIY 337 899****************9998844445565566666..3446*****777777777777.99*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGQMDGGDGG GGGHPYHYQA LLAAVHQQTV PFPNPFPAPS SGAEPPHPHN HNHNHNHNIH 60 NSHNHNHNHN AAPHPCHTPT PTPTPRGFAD WSASTSAFTS LAAHSSTAPS NAVHYSFSPC 120 YAFWTHYMLN KNAYPTSFPA PHDDHLRLAN NNHPTDAPGP ASSYGVESFT SPSMAPNICT 180 HMPPIEGPIS AKEDKKPEIL PRVVKSSDEL ETRNSNVEFH SETVGTLPES KQGHDSRATK 240 LLNSGEYQVI LRKELTKSDV GNVGRIVLPK KDAEASLPPL LQRDPLILHM DDMVLPVTWK 300 FKYRYWPNNK SRMYILDSAG EFLKTHGLQA GDVIIIYKNL APGKFIIRGE KAIHQQTTNP

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGQMDGGDGG GGGHPYHYQA LLAAVHQQTV PFPNPFPAPS SGAEPPHPHN HNHNHNHNIH  60
NSHNHNHNHN AAPHPCHTPT PTPTPRGFAD WSASTSAFTS LAAHSSTAPS NAVHYSFSPC  120
YAFWTHYMLN KNAYPTSFPA PHDDHLRLAN NNHPTDAPGP ASSYGVESFT SPSMAPNICT  180
HMPPIEGPIS AKEDKKPEIL PRVVKSSDEL ETRNSNVEFH SETVGTLPES KQGHDSRATK  240
LLNSGEYQVI LRKELTKSDV GNVGRIVLPK KDAEASLPPL LQRDPLILHM DDMVLPVTWK  300
FKYRYWPNNK SRMYILDSAG EFLKTHGLQA GDVIIIYKNL APGKFIIRGE KAIHQQTTNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-34	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G00050.2