PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G00280.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 293aa    MW: 32540.2 Da    PI: 5.7441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G00280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM123.91.3e-38141251106
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka....eekewyfFskrdkkyatgkrknratksgyWkat 86 
                      +ppGfrFhPt+eelv +yL++kv+++k++l ++i+e+d+y++ePwdL++       +    e++ewyfFs +d+ky++g+r+nrat++g+Wkat
  ONIVA08G00280.1  14 VPPGFRFHPTEEELVGYYLARKVASQKIDL-DIIQELDLYRIEPWDLQErckyG--GhggdEQTEWYFFSYKDRKYPSGTRTNRATAAGFWKAT 104
                      69****************************.99**************9535441..14443666****************************** PP

              NAM  87 gkdkevlsk.kgelvglkktL 106
                      g+dk+vls+ +++++g++ktL
  ONIVA08G00280.1 105 GRDKPVLSSpSTRVIGMRKTL 125
                      *******9988899******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDRHEEEAGE SPCVPPGFRF HPTEEELVGY YLARKVASQK IDLDIIQELD LYRIEPWDLQ  60
ERCKYGGHGG DEQTEWYFFS YKDRKYPSGT RTNRATAAGF WKATGRDKPV LSSPSTRVIG  120
MRKTLEEGWV VCRAFQKPMP NQQQHRLSYG CIPGSYGAGA YAAVPDNYSL LLHHDNPSFA  180
GRPLMSAAAS ALFANNNNNS VVDHSNILSS ESKLHFSDMM PPLESPTIVD GEGYVSQASS  240
CVDVDQQAGI VDWNLLTSLL PPPAHQLFHH LPSASSSKNS NNISSSGFID DRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.14e-63NAC family protein