PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G00590.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 306aa    MW: 32513.2 Da    PI: 6.8869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G00590.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-09172212954
                      HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r RR+ri +++  L++l+P       +K++ a++L +A++YIk L
  ONIVA08G00590.1 172 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYIKFL 212
                      699*****************87.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDNMTHNSSS SSSWDLDMSL GSHHHPLLFD QPPPPPPPPP PPPLPFHLHH HPLDPSPSSS  60
LFPPPPHHHH HAHHLHHPLD LDQRRGHHDY GGGDQGGDEE LRLQQEAAAG GGGGGQDGGG  120
GGDQDADEEL GAMKEMMYRI AAMQPVDIDP ATIKKPRRRN VRISDDPQSV AARHRRERIS  180
ERIRILQRLV PGGTKMDTAS MLDEAIRYIK FLKRQVQELQ HQPGPPPPPY PAGAAPAAGP  240
STSAVGPPGR PFLPLGGGGP MIDWVGLTRP VDIHGPTSSS SSSSMGGALG FGFGGGGGGQ  300
SSHGMH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.12e-37bHLH family protein