PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G02450.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 790aa    MW: 84630 Da    PI: 6.3929
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G02450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.4e-21118173156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      +++ +++t++q++eLe++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  ONIVA08G02450.1 118 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 173
                      688999***********************************************999 PP
2START200.95.4e-632945201206
                      HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
            START   1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                      ela +a++elv++a+++ep+W      e + ++e+ ++f+++ +      ++ea+r+++vv+m+++ lve l+d++ qW+  +     +a+tle
  ONIVA08G02450.1 294 ELAVAAMEELVRMAQLGEPLWAPALggEALGEEEYARTFPRGLGpkspeLRSEASRETAVVIMNHVSLVEMLMDVG-QWTALFSsivsRAATLE 386
                      57899********************99999*********998889*******************************.99999999999****** PP

                      EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EE.SSEEEEEEEECTCEEEEEE CS
            START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRael.lpSgiliepksnghskvtw 166
                      v+s+g      galqlm+ae+q++splvp R+  f+Ry++q+++g+w++vdvS+d  +       ++  +R+++ +pSg+li++++ng+skvtw
  ONIVA08G02450.1 387 VLSTGvagnhnGALQLMSAEFQMPSPLVPtRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGggcQPAAARGHRrRPSGCLIQEMPNGYSKVTW 480
                      ************************************************************9999********8537****************** PP

                      EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                      vehv+ +++++h+l++++v+sg+a+ga++wvatl+rqce+
  ONIVA08G02450.1 481 VEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 520
                      **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 790 aa     Download sequence    
MSPAMIGRPN GGGGGGGVAY ASSSSALSLG QSLLDGHHHQ LPSLLQQHHN GHHLLDQHQQ  60
HQHQLPPQAT TTSESDGRAP RDELEMSKSG GSDNLESGGG GGGGGSGDDQ DPNQRPRKKR  120
YHRHTQHQIQ ELEAFFKECP HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKTQHERHE  180
NNALRAENEK LRAENMRYKE ALANASCPNC GGPAAIGEMS FDEHHLRLEN ARLRDEIDRI  240
SAIAAKYVGK PAAAVSAAYP PLPPSNRSPL DHMGIPGAGA DVFGADFDKP LVIELAVAAM  300
EELVRMAQLG EPLWAPALGG EALGEEEYAR TFPRGLGPKS PELRSEASRE TAVVIMNHVS  360
LVEMLMDVGQ WTALFSSIVS RAATLEVLST GVAGNHNGAL QLMSAEFQMP SPLVPTRETQ  420
FLRYCKQHPD GTWAVVDVSL DGLRAGAGGG CQPAAARGHR RRPSGCLIQE MPNGYSKVTW  480
VEHVEADDQM VHNLYKPVVN SGMAFGARRW VATLERQCER LASAMASNVA SSGDAGVITT  540
SEGRRSMLKL AERMVASFCG GVTASTTHQW TTLSGSGAED VRVMTRKSVD DPGRPPGIIL  600
NAATSFWLPV PPSRVFDFLR DDSTRSEWDI LSNGGVVQEM AHIANGRDHG NAVSLLRVNN  660
ANSNQSNMLI LQESCTDASG SYVIYAPVDV VAMNVVLNGG DPDYVALLPS GFAILPDGPD  720
GGGGSLLTVA FQILVDSVPT AKLSLGSVAT VNSLIACTVE RIKAAITGDN GVAPPCPRGS  780
REGSRANSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein