PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G04340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 175aa    MW: 19447.5 Da    PI: 5.5007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G04340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.5e-173685255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++  + ++ g
  ONIVA08G04340.1 36 EYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLSAISISG 85
                     588******.**********865...5*******************99988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MADAAEQHHR QEETAAATTT PQQMMMRRRR ARASSEYLGV RRRPWGRYAA EIRNPYTKER  60
HWLGTFDTAE EAAVAYDLSA ISISGAAAAR TNFLYPDMHH HHPSPPQHAL SPAVPPPPPP  120
PPPSPLYDDD YLSPAAAEEE VEAGDDESLT IATILQSFQY QQSVPPASSG SMFYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-25ERF family protein