PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G10560.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 203aa MW: 21749.8 Da PI: 10.8608

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G10560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.4e-05	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ Cg+sFs+ L H +H ONIVA08G10560.1 145 FKCSVCGRSFSSYQALGGHKTSH 167 89**********99998888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MIRENRGPTC QRGHVSTLSL FPLLSLPPLS LSLFSASRPV AGAKAARVRR RRQVANGETE 60 ALHAAVLKEE EQQHEVEEAA VVTSSSATSG EEGGHLPQGW AKRKRSRRQR SEEENLALCL 120 LMLALGGHHR VQAPPPLSAP VGAEFKCSVC GRSFSSYQAL GGHKTSHRFK LPTPPASPVL 180 APASSEVQSP LAFSPRNSAA ARI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67450.1	7e-10	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G10560.1