PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G11320.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 403aa MW: 45957.2 Da PI: 7.3872

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G11320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.3	5.1e-17	35	114	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +++pk+f+++ +g+ + +++le+ + +s++v++ +k+++++++++GW +Fvk +L+ gD+++F+++g+s+f v +f+ ONIVA08G11320.1 35 QHEITIPKEFVQRLKGD--IPEEIQLETHNRNSYTVRV--DKSQEKVIFAAGWAQFVKTFDLRMGDSMMFRFKGNSQF--DVIIFD 114 5679*****999888..5668***********..********************************9999..777776 PP
2	B3	40.5	5e-13	319	399	14	99
T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + l++ k++++e+ gg+ + ++ g +W ++l +++g+ + + +GW++Fv++n+ +gD+++F+l +++++++ v+++++ ONIVA08G11320.1 319 STLSVAKRYVDEYlGGE-----RFISLSRLGGKWGIRL--AGGGGSgTRMVGGWQKFVNENDFGVGDICLFELLKNHKGTMEVHIIKA 399 67999999999996544.....2555678999****..555555588999******************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGTWCERCRR RDEQDYRNLD DCQKHLLLLM MGDFQHEITI PKEFVQRLKG DIPEEIQLET 60 HNRNSYTVRV DKSQEKVIFA AGWAQFVKTF DLRMGDSMMF RFKGNSQFDV IIFDQVGREK 120 VCSVAVDDYL DPNVQEGRTD ATETLNSSRA HSQDDYLDPN VQEGRTNATE TLNSSRAHSQ 180 PMPMQTPATE TLNSSRAHPQ PMPMQLPTET VNHFHAPHYP MQMPIENMAL SRTQAMPTQM 240 QSPPTYRWTQ VQRDNLRYSL PSEDQGCRVG VIPDPIIGRR TKLNPVQEKV VNFKIQHIHS 300 EIPIFVAVIK RSNVSGVLST LSVAKRYVDE YLGGERFISL SRLGGKWGIR LAGGGGSGTR 360 MVGGWQKFVN ENDFGVGDIC LFELLKNHKG TMEVHIIKAK DIF

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGTWCERCRR RDEQDYRNLD DCQKHLLLLM MGDFQHEITI PKEFVQRLKG DIPEEIQLET  60
HNRNSYTVRV DKSQEKVIFA AGWAQFVKTF DLRMGDSMMF RFKGNSQFDV IIFDQVGREK  120
VCSVAVDDYL DPNVQEGRTD ATETLNSSRA HSQDDYLDPN VQEGRTNATE TLNSSRAHSQ  180
PMPMQTPATE TLNSSRAHPQ PMPMQLPTET VNHFHAPHYP MQMPIENMAL SRTQAMPTQM  240
QSPPTYRWTQ VQRDNLRYSL PSEDQGCRVG VIPDPIIGRR TKLNPVQEKV VNFKIQHIHS  300
EIPIFVAVIK RSNVSGVLST LSVAKRYVDE YLGGERFISL SRLGGKWGIR LAGGGGSGTR  360
MVGGWQKFVN ENDFGVGDIC LFELLKNHKG TMEVHIIKAK DIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-16	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G11320.1