PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G13220.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 467aa MW: 51492.4 Da PI: 8.2057

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G13220.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	37.4	5.1e-12	13	51	3	42
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 k +C+Ck skClk+YCeCf++g++C C+C++C+N+ ++ ONIVA08G13220.3 13 KTNCSCKYSKCLKLYCECFEKGRYCIG-CNCTNCCNNVNH 51 789**********************.******9875 PP
2	TCR	47.8	3e-15	94	134	1	41
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k++kgC+Ck+++ClkkYCeCf+a ++Cse+C+C++CkN ++ ONIVA08G13220.3 94 KHTKGCKCKRTECLKKYCECFKASVFCSENCRCTGCKNYKS 134 589***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MWSETKDVTL TRKTNCSCKY SKCLKLYCEC FEKGRYCIGC NCTNCCNNVN HENARQDAIN 60 VALERNPAAF MPKVSNSTAH NCESKAAEGD IVGKHTKGCK CKRTECLKKY CECFKASVFC 120 SENCRCTGCK NYKSNADRIS QKNTVHAHHV QNPASSGMVG QSVIIFHAAE NDSSLSLAAS 180 VSDHSINNNT SHALSCSLTS SVTREDAKSL VKYAPHEVTY RPSLADIIQI EDVNELCNLL 240 ILVSRQAGAT LLESGMKENT KRKKLNRVDS CLSSTNHDRE AIQKEPAKQM CSLEKSSNEV 300 LIAEGRLELP RADPFDIQKG NKRPLSPGTQ ALMCDEQDAI FQDSKAPDAT PSTTEENLVD 360 IFKEQEKLVL TNFRDYLCKL ATCGKLQELK LSLASTNCSE QAFADHGNNS SITRVAKDQT 420 NNPSVLQQGG KHYRSGRLIL ARTKIGNAGI WKLMGQKSPL HNGVDKC

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MWSETKDVTL TRKTNCSCKY SKCLKLYCEC FEKGRYCIGC NCTNCCNNVN HENARQDAIN  60
VALERNPAAF MPKVSNSTAH NCESKAAEGD IVGKHTKGCK CKRTECLKKY CECFKASVFC  120
SENCRCTGCK NYKSNADRIS QKNTVHAHHV QNPASSGMVG QSVIIFHAAE NDSSLSLAAS  180
VSDHSINNNT SHALSCSLTS SVTREDAKSL VKYAPHEVTY RPSLADIIQI EDVNELCNLL  240
ILVSRQAGAT LLESGMKENT KRKKLNRVDS CLSSTNHDRE AIQKEPAKQM CSLEKSSNEV  300
LIAEGRLELP RADPFDIQKG NKRPLSPGTQ ALMCDEQDAI FQDSKAPDAT PSTTEENLVD  360
IFKEQEKLVL TNFRDYLCKL ATCGKLQELK LSLASTNCSE QAFADHGNNS SITRVAKDQT  420
NNPSVLQQGG KHYRSGRLIL ARTKIGNAGI WKLMGQKSPL HNGVDKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.2	2e-63	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G13220.3