PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G17170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ZF-HD
Protein Properties Length: 251aa    MW: 27192.6 Da    PI: 8.4439
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G17170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer941.2e-29158213258
      ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                       +vrY eC++NhAa++GghavDGC+Ef+++ geegt  al+CaACgCHR+FHRr v+
  ONIVA08G17170.1 158 GRVRYGECRRNHAARMGGHAVDGCREFLAE-GEEGTGGALRCAACGCHRSFHRRVVV 213
                      579**************************8.999********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRFLSYAWA IIWASISWIG GPLDTGLVVW WRYREEIGQS EDATRDGNCA RLPVYPRAGG  60
TQDSAKRTAS RSHHVAAVSL QRRLGEQREQ EYVARATRGH RDALQRDRQI TECDESGRSG  120
SINAMMKRMV ILRRCEPPPP PPPQPAAAVV AAMGGCCGRV RYGECRRNHA ARMGGHAVDG  180
CREFLAEGEE GTGGALRCAA CGCHRSFHRR VVVVQQCCAC DTAAAAAAAG GWEWRDCSPE  240
SSSSASSTTA S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.12e-18ZF-HD family protein