PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G21210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NF-YC

Protein Properties

Length: 205aa MW: 21909 Da PI: 5.9297

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G21210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	170.6	1.8e-53	68	171	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 ql++fw++q ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdf ONIVA08G21210.1 68 QLQNFWAEQyreIEHTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDF 161 89****99999***************************************************************************** PP NF-YC 92 lvdivprdel 101 lvdivprde ONIVA08G21210.1 162 LVDIVPRDEA 171 ******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MEPKSTTPPP PPPPPVLGAP VPYPPAGAYP PPVGPYAHAP PLYAPPPPAA AAASAAATAA 60 SQQAAAAQLQ NFWAEQYREI EHTTDFKNHN LPLARIKKIM KADEDVRMIA AEAPVVFARA 120 CEMFILELTH RGWAHAEENK RRTLQKSDIA AAIARTEVFD FLVDIVPRDE AKDAEAAAAV 180 AAGIPHPAAG LPATDPMAYY YVQPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	147	RRTLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	4e-59	NF-YC family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G21210.1