PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G22410.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 404aa    MW: 41945.6 Da    PI: 8.233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G22410.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.4e-13335380655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+Lq
  ONIVA08G22410.1 335 SIAERVRRTRISERIRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 380
                      689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MYGSPVSKDL NLPVQPPAMS SSGLLRYRSA PSTLLAEFCD DFLPPAAAPR AASPDADNVF  60
SRFLADHQIR DKSPPATAAA AAAAAAAHFP DDPTMATQHH HQQQMMFQHH PQQMASVEGL  120
YRTVSSTGID AATAAANAAG GGGGGLLRQS SSPAGFLNHL NMDNGYGSML RAGMAAAGGG  180
GGVGFRNGAN AAAAADSPGG SGGRLKGQLS FSSRQGSLMS QISEMDSEEL GGSSPEGAGG  240
GGGGGGRGYL SGYPMSSGWE ESSLMSDTNI SGVKRQRDSS EPSQNGGGGG GGLAHQFSLP  300
KTSSEMAAIE KFLQFQDAVP CKIRAKRGCA THPRSIAERV RRTRISERIR KLQELVPNMD  360
KQTNTADMLD LAVDYIKDLQ KQVKGLNDSR ANCTCSAKHQ QYSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-44bHLH family protein