PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G24840.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 232aa    MW: 24682.2 Da    PI: 10.2589
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G24840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.15.4e-30191551128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk.atgkdkev 92 
                      lppGfrFhPtdeelvv+yL++k+ g +l++  vi+++ +++k++Pwd+p +  +++ + yfF+ r  ++ +g+r++ +++ g Wk a g+dk+v
  ONIVA08G24840.1  19 LPPGFRFHPTDEELVVQYLRRKAFGLPLPA-AVIPDLhNLFKLDPWDIPGA--SSDGDKYFFAVRPPAA-RGRRQQVTASGGCWKpAGGRDKPV 108
                      79****************************.8899998***********43..456789*****99875.68899999999****66678***9 PP

              NAM  93 lsk...kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                      +++   +++lvg+kk +vf          + a  +    Wvmhey+l
  ONIVA08G24840.1 109 VVArcgGSHLVGVKKGMVFVprqgrkapAAAAAAAGGGCWVMHEYSL 155
                      9988988999**********8854433222333333667******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MERAAAAAPV VVRHGGVVLP PGFRFHPTDE ELVVQYLRRK AFGLPLPAAV IPDLHNLFKL  60
DPWDIPGASS DGDKYFFAVR PPAARGRRQQ VTASGGCWKP AGGRDKPVVV ARCGGSHLVG  120
VKKGMVFVPR QGRKAPAAAA AAAGGGCWVM HEYSLALPMH KKGCLAEAEE WVVCRIFQRS  180
SSGSRSPRRP DNDVRRTMPA VAELGRSPSP SSSSSQSSCV TSSSDQEEVS SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-31NAC family protein